J3_7PIR_009

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UCUGGAC*GACAAC*GUA

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|3|U|1372
7PIR|1|3|C|1373
7PIR|1|3|U|1374
7PIR|1|3|G|1375
7PIR|1|3|G|1376
7PIR|1|3|A|1377
7PIR|1|3|C|1378
*
7PIR|1|3|G|1409
7PIR|1|3|A|1410
7PIR|1|3|C|1411
7PIR|1|3|A|1412
7PIR|1|3|A|1413
7PIR|1|3|C|1414
*
7PIR|1|3|G|1429
7PIR|1|3|U|1430
7PIR|1|3|A|1431

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain s

50S ribosomal protein L23

Chain w

50S ribosomal protein L29