J3_7PJX_033
3D structure
- PDB id
- 7PJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GC*GGAAUAU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PJX_033 not in the Motif Atlas
- Geometric match to J3_8C3A_082
- Geometric discrepancy: 0.1951
- The information below is about J3_8C3A_082
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.2
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
7PJX|1|a|G|46
7PJX|1|a|C|47
*
7PJX|1|a|G|361
7PJX|1|a|G|362
7PJX|1|a|A|363
7PJX|1|a|A|364
7PJX|1|a|U|365
7PJX|1|a|A|366
7PJX|1|a|U|367
*
7PJX|1|a|A|393
7PJX|1|a|G|394
7PJX|1|a|C|395
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
- Chain x
- Elongation factor G
Coloring options: