J3_7PO0_007
3D structure
- PDB id
- 7PO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUCAG*CGCAAGU*AAAGACG
- Length
- 20 nucleotides
- Bulged bases
- 7PO0|1|A|U|1270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PO0_007 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.5915
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PO0|1|A|C|1268
7PO0|1|A|U|1269
7PO0|1|A|U|1270
7PO0|1|A|C|1271
7PO0|1|A|A|1272
7PO0|1|A|G|1273
*
7PO0|1|A|C|1302
7PO0|1|A|G|1303
7PO0|1|A|C|1304
7PO0|1|A|A|1305
7PO0|1|A|A|1306
7PO0|1|A|G|1307
7PO0|1|A|U|1308
*
7PO0|1|A|A|1317
7PO0|1|A|A|1318
7PO0|1|A|A|1319
7PO0|1|A|G|1320
7PO0|1|A|A|1321
7PO0|1|A|C|1322
7PO0|1|A|G|1323
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 1
- 28S ribosomal protein S35, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
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