J3_7PWO_013

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GG*CGG(A2M)ACUUG*CGGC

Length

15 nucleotides

Bulged bases

7PWO|1|2|G|347, 7PWO|1|2|U|352

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|G|40
7PWO|1|2|G|41
*
7PWO|1|2|C|345
7PWO|1|2|G|346
7PWO|1|2|G|347
7PWO|1|2|A2M|348
7PWO|1|2|A|349
7PWO|1|2|C|350
7PWO|1|2|U|351
7PWO|1|2|U|352
7PWO|1|2|G|353
*
7PWO|1|2|C|373
7PWO|1|2|G|374
7PWO|1|2|G|375
7PWO|1|2|C|376

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain J1

Ribosomal protein S9

Chain X1

Ribosomal protein S23