J3_7PWO_014

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GCGGUCGCC*GUGCGCG*CAGCGACGGCC

Length

27 nucleotides

Bulged bases

7PWO|1|2|C|203

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|G|111
7PWO|1|2|C|112
7PWO|1|2|G|113
7PWO|1|2|G|114
7PWO|1|2|U|115
7PWO|1|2|C|116
7PWO|1|2|G|124
7PWO|1|2|C|125
7PWO|1|2|C|126
*
7PWO|1|2|G|156
7PWO|1|2|U|157
7PWO|1|2|G|158
7PWO|1|2|C|159
7PWO|1|2|G|160
7PWO|1|2|C|161
7PWO|1|2|G|162
*
7PWO|1|2|C|197
7PWO|1|2|A|198
7PWO|1|2|G|199
7PWO|1|2|C|200
7PWO|1|2|G|201
7PWO|1|2|A|202
7PWO|1|2|C|203
7PWO|1|2|G|204
7PWO|1|2|G|205
7PWO|1|2|C|206
7PWO|1|2|C|207

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain E1

40S ribosomal protein S4

Chain G1

40S ribosomal protein S6

Chain I1

40S ribosomal protein S8