J3_7PWO_016

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCCG*CCCAG*CGGGAG

Length

15 nucleotides

Bulged bases

7PWO|1|2|G|833, 7PWO|1|2|A|835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|C|789
7PWO|1|2|C|790
7PWO|1|2|C|791
7PWO|1|2|G|792
*
7PWO|1|2|C|820
7PWO|1|2|C|821
7PWO|1|2|C|822
7PWO|1|2|A|823
7PWO|1|2|G|824
*
7PWO|1|2|C|831
7PWO|1|2|G|832
7PWO|1|2|G|833
7PWO|1|2|G|834
7PWO|1|2|A|835
7PWO|1|2|G|836

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain A1

40S ribosomal protein SA

Chain V1

40S ribosomal protein S21

Chain W1

Ribosomal protein S15A

Chain a1

40S ribosomal protein S26

Chain b1

Ribosomal protein S27