J3_7PZY_009
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- UGAAGUG*CAA*UCUA
- Length
- 14 nucleotides
- Bulged bases
- 7PZY|1|1|A|1478
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_009 not in the Motif Atlas
- Homologous match to J3_8C3A_006
- Geometric discrepancy: 0.0662
- The information below is about J3_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_10154.2
- Basepair signature
- cWW-tWW-tHW-cWW-tSH-cWW-cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
7PZY|1|1|U|1475
7PZY|1|1|G|1476
7PZY|1|1|A|1477
7PZY|1|1|A|1478
7PZY|1|1|G|1479
7PZY|1|1|U|1480
7PZY|1|1|G|1481
*
7PZY|1|1|C|1853
7PZY|1|1|A|1854
7PZY|1|1|A|1855
*
7PZY|1|1|U|1867
7PZY|1|1|C|1868
7PZY|1|1|U|1869
7PZY|1|1|A|1870
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain z
- Ribosomal protein L19
Coloring options: