J3_7PZY_013
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_013 not in the Motif Atlas
- Homologous match to J3_8C3A_008
- Geometric discrepancy: 0.0525
- The information below is about J3_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_18654.1
- Basepair signature
- cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PZY|1|1|A|2410
7PZY|1|1|U|2411
7PZY|1|1|U|2412
7PZY|1|1|G|2413
*
7PZY|1|1|C|2490
7PZY|1|1|U|2491
7PZY|1|1|U|2492
7PZY|1|1|A|2493
7PZY|1|1|U|2494
7PZY|1|1|U|2495
*
7PZY|1|1|A|2562
7PZY|1|1|A|2563
7PZY|1|1|G|2564
7PZY|1|1|A|2565
7PZY|1|1|C|2566
7PZY|1|1|A|2567
7PZY|1|1|U|2568
7PZY|1|1|U|2569
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AJ
- 60S ribosomal protein L36
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain p
- 60S ribosomal protein L8
- Chain v
- Ribosomal protein L15
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