J3_7PZY_020
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- AG*CGCAAAU*AGU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_020 not in the Motif Atlas
- Geometric match to J3_4V88_078
- Geometric discrepancy: 0.065
- The information below is about J3_4V88_078
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.1
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
7PZY|1|A|A|41
7PZY|1|A|G|42
*
7PZY|1|A|C|431
7PZY|1|A|G|432
7PZY|1|A|C|433
7PZY|1|A|A|434
7PZY|1|A|A|435
7PZY|1|A|A|436
7PZY|1|A|U|437
*
7PZY|1|A|A|462
7PZY|1|A|G|463
7PZY|1|A|U|464
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain K
- Ribosomal 40S subunit protein S9B
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: