J3_7Q08_019
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CCAUAU*AG*UG
- Length
- 10 nucleotides
- Bulged bases
- 7Q08|1|3|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q08_019 not in the Motif Atlas
- Homologous match to J3_7RQB_015
- Geometric discrepancy: 0.3375
- The information below is about J3_7RQB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08462.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7Q08|1|3|C|9
7Q08|1|3|C|10
7Q08|1|3|A|11
7Q08|1|3|U|12
7Q08|1|3|A|13
7Q08|1|3|U|14
*
7Q08|1|3|A|66
7Q08|1|3|G|67
*
7Q08|1|3|U|111
7Q08|1|3|G|112
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain m
- Ribosomal 60S subunit protein L5
- Chain r
- Ribosomal 60S subunit protein L10
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