3D structure

PDB id
7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Candida albicans 80S ribosome in complex with cycloheximide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.56 Å

Loop

Sequence
CAAAUUUGAAAU*AGUUGUAAUUUGAAG*CGACG
Length
32 nucleotides
Bulged bases
7Q08|1|1|U|116, 7Q08|1|1|G|119, 7Q08|1|1|A|120, 7Q08|1|1|U|146, 7Q08|1|1|A|155
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Q08|1|1|C|112
7Q08|1|1|A|113
7Q08|1|1|A|114
7Q08|1|1|A|115
7Q08|1|1|U|116
7Q08|1|1|U|117
7Q08|1|1|U|118
7Q08|1|1|G|119
7Q08|1|1|A|120
7Q08|1|1|A|121
7Q08|1|1|A|122
7Q08|1|1|U|123
*
7Q08|1|1|A|143
7Q08|1|1|G|144
7Q08|1|1|U|145
7Q08|1|1|U|146
7Q08|1|1|G|147
7Q08|1|1|U|148
7Q08|1|1|A|149
7Q08|1|1|A|150
7Q08|1|1|U|151
7Q08|1|1|U|152
7Q08|1|1|U|153
7Q08|1|1|G|154
7Q08|1|1|A|155
7Q08|1|1|A|156
7Q08|1|1|G|157
*
7Q08|1|1|C|263
7Q08|1|1|G|264
7Q08|1|1|A|265
7Q08|1|1|C|266
7Q08|1|1|G|267

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain 4
5.8S ribosomal RNA; 5.8S rRNA
Chain AI
Ribosomal 60S subunit protein L35A
Chain AJ
60S ribosomal protein L36
Chain p
60S ribosomal protein L8
Chain t
60S ribosomal protein L13
Chain v
Ribosomal protein L15

Coloring options:

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