J3_7Q08_040
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UUUUAGAUG*CAUAGCAGG*CGGAUAGCAAUGUCAACA
- Length
- 36 nucleotides
- Bulged bases
- 7Q08|1|1|A|3142, 7Q08|1|1|G|3143, 7Q08|1|1|A|3180, 7Q08|1|1|G|3181, 7Q08|1|1|C|3182, 7Q08|1|1|G|3184, 7Q08|1|1|A|3233, 7Q08|1|1|A|3235, 7Q08|1|1|C|3237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q08|1|1|U|3138
7Q08|1|1|U|3139
7Q08|1|1|U|3140
7Q08|1|1|U|3141
7Q08|1|1|A|3142
7Q08|1|1|G|3143
7Q08|1|1|A|3144
7Q08|1|1|U|3145
7Q08|1|1|G|3146
*
7Q08|1|1|C|3177
7Q08|1|1|A|3178
7Q08|1|1|U|3179
7Q08|1|1|A|3180
7Q08|1|1|G|3181
7Q08|1|1|C|3182
7Q08|1|1|A|3183
7Q08|1|1|G|3184
7Q08|1|1|G|3185
*
7Q08|1|1|C|3230
7Q08|1|1|G|3231
7Q08|1|1|G|3232
7Q08|1|1|A|3233
7Q08|1|1|U|3234
7Q08|1|1|A|3235
7Q08|1|1|G|3236
7Q08|1|1|C|3237
7Q08|1|1|A|3238
7Q08|1|1|A|3239
7Q08|1|1|U|3240
7Q08|1|1|G|3241
7Q08|1|1|U|3242
7Q08|1|1|C|3243
7Q08|1|1|A|3244
7Q08|1|1|A|3245
7Q08|1|1|C|3246
7Q08|1|1|A|3247
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain n
- 60S ribosomal protein L6
- Chain u
- Ribosomal 60S subunit protein L14B
- Chain w
- Ribosomal 60S subunit protein L16A
- Chain x
- Ribosomal 60S subunit protein L17B
Coloring options: