J3_7Q0R_001
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CAAAUUUGAAA*UAAUUUGAAG*CGACG
- Length
- 26 nucleotides
- Bulged bases
- 7Q0R|1|1|A|155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0R_001 not in the Motif Atlas
- Homologous match to J3_8C3A_001
- Geometric discrepancy: 0.0525
- The information below is about J3_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88489.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-tWH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7Q0R|1|1|C|112
7Q0R|1|1|A|113
7Q0R|1|1|A|114
7Q0R|1|1|A|115
7Q0R|1|1|U|116
7Q0R|1|1|U|117
7Q0R|1|1|U|118
7Q0R|1|1|G|119
7Q0R|1|1|A|120
7Q0R|1|1|A|121
7Q0R|1|1|A|122
*
7Q0R|1|1|U|148
7Q0R|1|1|A|149
7Q0R|1|1|A|150
7Q0R|1|1|U|151
7Q0R|1|1|U|152
7Q0R|1|1|U|153
7Q0R|1|1|G|154
7Q0R|1|1|A|155
7Q0R|1|1|A|156
7Q0R|1|1|G|157
*
7Q0R|1|1|C|263
7Q0R|1|1|G|264
7Q0R|1|1|A|265
7Q0R|1|1|C|266
7Q0R|1|1|G|267
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AJ
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L8
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
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