J3_7Q0R_003
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- AGAC*GGG*CAUAAU
- Length
- 13 nucleotides
- Bulged bases
- 7Q0R|1|1|U|618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0R_003 not in the Motif Atlas
- Homologous match to J3_8C3A_002
- Geometric discrepancy: 0.0863
- The information below is about J3_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_50081.1
- Basepair signature
- cWW-cSS-cWW-tSS-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7Q0R|1|1|A|436
7Q0R|1|1|G|437
7Q0R|1|1|A|438
7Q0R|1|1|C|439
*
7Q0R|1|1|G|488
7Q0R|1|1|G|489
7Q0R|1|1|G|490
*
7Q0R|1|1|C|616
7Q0R|1|1|A|617
7Q0R|1|1|U|618
7Q0R|1|1|A|619
7Q0R|1|1|A|620
7Q0R|1|1|U|621
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AF
- Ribosomal 60S subunit protein L32
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain n
- 60S ribosomal protein L6
- Chain x
- Ribosomal 60S subunit protein L17B
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