J3_7Q0R_023
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- AUCAG*CUAACUACUG*CAUUU
- Length
- 20 nucleotides
- Bulged bases
- 7Q0R|1|A|C|919
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0R_023 not in the Motif Atlas
- Homologous match to J3_8C3A_036
- Geometric discrepancy: 0.0471
- The information below is about J3_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08408.1
- Basepair signature
- cWW-F-F-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
7Q0R|1|A|A|866
7Q0R|1|A|U|867
7Q0R|1|A|C|868
7Q0R|1|A|A|869
7Q0R|1|A|G|870
*
7Q0R|1|A|C|912
7Q0R|1|A|U|913
7Q0R|1|A|A|914
7Q0R|1|A|A|915
7Q0R|1|A|C|916
7Q0R|1|A|U|917
7Q0R|1|A|A|918
7Q0R|1|A|C|919
7Q0R|1|A|U|920
7Q0R|1|A|G|921
*
7Q0R|1|A|C|928
7Q0R|1|A|A|929
7Q0R|1|A|U|930
7Q0R|1|A|U|931
7Q0R|1|A|U|932
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain C
- 40S ribosomal protein S1
- Chain O
- Ribosomal 40S subunit protein S13
- Chain P
- Ribosomal 40S subunit protein S14B
- Chain b
- 40S ribosomal protein S26
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