Motif J3_08408.1 Version J3_08408.1 of this group appears in releases 3.80 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 1-19 | 7-11 | 9-10 | 12-17 | 13-16 | 14-15 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8C3A_036 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | C | 912 | U | 913 | A | 914 | A | 915 | C | 916 | U | 917 | A | 918 | U | 920 | G | 921 | * | C | 928 | A | 929 | U | 930 | U | 931 | U | 932 | * | A | 866 | U | 867 | C | 868 | A | 869 | G | 870 | cWW | tWW | cWW | cWW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUCAG*CUAACUACUG*CAUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCA*UAACUACU*AUU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-F-F-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: