J3_7Q0R_024
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CUA*UUACG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7Q0R|1|A|A|1078
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0R_024 not in the Motif Atlas
- Homologous match to J3_8C3A_037
- Geometric discrepancy: 0.0913
- The information below is about J3_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_95208.1
- Basepair signature
- cWW-tWW-tWW-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7Q0R|1|A|C|1022
7Q0R|1|A|U|1023
7Q0R|1|A|A|1024
*
7Q0R|1|A|U|1064
7Q0R|1|A|U|1065
7Q0R|1|A|A|1066
7Q0R|1|A|C|1067
7Q0R|1|A|G|1068
*
7Q0R|1|A|C|1075
7Q0R|1|A|A|1076
7Q0R|1|A|A|1077
7Q0R|1|A|A|1078
7Q0R|1|A|G|1079
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain B
- 40S ribosomal protein S0
- Chain W
- 40S ribosomal protein S21
- Chain X
- 40S ribosomal protein S22-A
- Chain b
- 40S ribosomal protein S26
- Chain c
- 40S ribosomal protein S27
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