J3_7Q7Z_006
3D structure
- PDB id
- 7Q7Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the methyltransferase-ribozyme 1 (with 1-benzylamine-adenosine)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.26 Å
Loop
- Sequence
- G(9SI)G*CUGACCGACCC*GACAACUAGACAUAC
- Length
- 29 nucleotides
- Bulged bases
- 7Q7Z|1|C|U|36
- QA status
- Modified nucleotides: 9SI
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q7Z_006 not in the Motif Atlas
- Geometric match to J3_8ZAU_003
- Geometric discrepancy: 0.1171
- The information below is about J3_8ZAU_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_65214.1
- Basepair signature
- cWW-tWH-F-F-cWW-cWS-F-tSW-cWW-cSW-F-cWW-F-F-F-F-F-cWW-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7Q7Z|1|A|G|6
7Q7Z|1|A|9SI|7
7Q7Z|1|A|G|8
*
7Q7Z|1|B|C|8
7Q7Z|1|B|U|9
7Q7Z|1|B|G|10
7Q7Z|1|B|A|11
7Q7Z|1|B|C|12
7Q7Z|1|B|C|13
7Q7Z|1|B|G|14
7Q7Z|1|B|A|15
7Q7Z|1|B|C|16
7Q7Z|1|B|C|17
7Q7Z|1|B|C|18
*
7Q7Z|1|C|G|30
7Q7Z|1|C|A|31
7Q7Z|1|C|C|32
7Q7Z|1|C|A|33
7Q7Z|1|C|A|34
7Q7Z|1|C|C|35
7Q7Z|1|C|U|36
7Q7Z|1|C|A|37
7Q7Z|1|C|G|38
7Q7Z|1|C|A|39
7Q7Z|1|C|C|40
7Q7Z|1|C|A|41
7Q7Z|1|C|U|42
7Q7Z|1|C|A|43
7Q7Z|1|C|C|44
Current chains
- Chain A
- RNA 1
- Chain B
- RNA 2
- Chain C
- RNA 3
Nearby chains
- Chain E
- RNA 2
- Chain F
- RNA 3
Coloring options: