J3_7Q80_002

3D structure

PDB id

7Q80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the methyltransferase-ribozyme 1, no Magnesium condition (with 1-methyl-adenosine)

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

G(1MA)G*CUGACC*GACAUAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_98379.3

Basepair signature

cWW-F-F-F-cWW-cWS-F-cWW-cSW-F-F-F

Number of instances in this motif group

3

Unit IDs

7Q80|1|D|G|6
7Q80|1|D|1MA|7
7Q80|1|D|G|8
*
7Q80|1|E|C|8
7Q80|1|E|U|9
7Q80|1|E|G|10
7Q80|1|E|A|11
7Q80|1|E|C|12
7Q80|1|E|C|13
*
7Q80|1|F|G|38
7Q80|1|F|A|39
7Q80|1|F|C|40
7Q80|1|F|A|41
7Q80|1|F|U|42
7Q80|1|F|A|43
7Q80|1|F|C|44

Current chains

Chain D

RNA 1

Chain E

RNA 2

Chain F

RNA 3

Nearby chains

Chain B

RNA 2

Chain C

RNA 3