J3_7QCA_001
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAGGAAG*CGAAUAC*GG
- Length
- 17 nucleotides
- Bulged bases
- 7QCA|1|L50|G|38, 7QCA|1|L50|A|100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|L50|C|35
7QCA|1|L50|G|36
7QCA|1|L50|A|37
7QCA|1|L50|G|38
7QCA|1|L50|G|39
7QCA|1|L50|A|40
7QCA|1|L50|A|41
7QCA|1|L50|G|42
*
7QCA|1|L50|C|95
7QCA|1|L50|G|96
7QCA|1|L50|A|97
7QCA|1|L50|A|98
7QCA|1|L50|U|99
7QCA|1|L50|A|100
7QCA|1|L50|C|101
*
7QCA|1|L50|G|113
7QCA|1|L50|G|114
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LG0
- 60S ribosomal protein L8
- Chain LHH
- Ribosomal L29 protein
- Chain LJJ
- eL37 LJJ
- Chain LLL
- 60S ribosomal protein L39
- Chain LN0
- Ribosomal protein L15
- Chain LX0
- 60S ribosomal protein L23a
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