J3_7QCA_004

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UUG*CAAG*CGUAAG

Length

13 nucleotides

Bulged bases

7QCA|1|L50|A|647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|U|579
7QCA|1|L50|U|580
7QCA|1|L50|G|581
*
7QCA|1|L50|C|615
7QCA|1|L50|A|616
7QCA|1|L50|A|617
7QCA|1|L50|G|618
*
7QCA|1|L50|C|643
7QCA|1|L50|G|644
7QCA|1|L50|U|645
7QCA|1|L50|A|646
7QCA|1|L50|A|647
7QCA|1|L50|G|648

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LA0

60S ribosomal protein L8

Chain LGG

Ribosomal protein L34

Chain LPP

60S ribosomal protein L37a