J3_7QCA_006

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAAG*CAAC*GAC

Length

11 nucleotides

Bulged bases

7QCA|1|L50|A|1449

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|1155
7QCA|1|L50|A|1156
7QCA|1|L50|A|1157
7QCA|1|L50|G|1158
*
7QCA|1|L50|C|1448
7QCA|1|L50|A|1449
7QCA|1|L50|A|1450
7QCA|1|L50|C|1451
*
7QCA|1|L50|G|1460
7QCA|1|L50|A|1461
7QCA|1|L50|C|1462

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LGG

Ribosomal protein L34

Chain LJJ

eL37 LJJ

Chain LLL

60S ribosomal protein L39