J3_7QCA_007

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGUA*UGUAUU*AUAUG

Length

15 nucleotides

Bulged bases

7QCA|1|L50|U|1268, 7QCA|1|L50|U|1430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|C|1254
7QCA|1|L50|G|1255
7QCA|1|L50|U|1256
7QCA|1|L50|A|1257
*
7QCA|1|L50|U|1266
7QCA|1|L50|G|1267
7QCA|1|L50|U|1268
7QCA|1|L50|A|1269
7QCA|1|L50|U|1270
7QCA|1|L50|U|1271
*
7QCA|1|L50|A|1427
7QCA|1|L50|U|1428
7QCA|1|L50|A|1429
7QCA|1|L50|U|1430
7QCA|1|L50|G|1431

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LGG

Ribosomal protein L34

Chain LZ0

60S ribosomal protein L27