J3_7QCA_011

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCC*GUAG*CCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|2514
7QCA|1|L50|C|2515
7QCA|1|L50|C|2516
*
7QCA|1|L50|G|2530
7QCA|1|L50|U|2531
7QCA|1|L50|A|2532
7QCA|1|L50|G|2533
*
7QCA|1|L50|C|2604
7QCA|1|L50|C|2605
7QCA|1|L50|A|2606
7QCA|1|L50|C|2607

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LB0

60S ribosomal protein L3

Chain LDD

60S ribosomal protein L31

Chain LP0

60S ribosomal protein L17