J3_7QCA_015

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GA*UAACAGAGG*CGC

Length

14 nucleotides

Bulged bases

7QCA|1|S60|A|636

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|585
7QCA|1|S60|A|586
*
7QCA|1|S60|U|630
7QCA|1|S60|A|631
7QCA|1|S60|A|632
7QCA|1|S60|C|633
7QCA|1|S60|A|634
7QCA|1|S60|G|635
7QCA|1|S60|A|636
7QCA|1|S60|G|637
7QCA|1|S60|G|638
*
7QCA|1|S60|C|645
7QCA|1|S60|G|646
7QCA|1|S60|C|647

Current chains

Chain S60

RNA SSU

Nearby chains

Chain LA0

60S ribosomal protein L8

Chain LPP

60S ribosomal protein L37a

Chain SAA

40S ribosomal protein S26

Chain SB0

eS1 SB0

Chain SO0

40S ribosomal protein S14