J3_7QCA_016

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGC*GAAG*CUAG

Length

11 nucleotides

Bulged bases

7QCA|1|S60|U|775

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|739
7QCA|1|S60|G|740
7QCA|1|S60|C|741
*
7QCA|1|S60|G|764
7QCA|1|S60|A|765
7QCA|1|S60|A|766
7QCA|1|S60|G|767
*
7QCA|1|S60|C|774
7QCA|1|S60|U|775
7QCA|1|S60|A|776
7QCA|1|S60|G|777

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SA0

40S ribosomal protein S0

Chain SAA

40S ribosomal protein S26

Chain SBB

eS27 SBB

Chain SV0

Ribosomal protein S21E

Chain SW0

40S ribosomal protein S15A