J3_7QCA_021
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UAACGA*UGAGAUC*GGCAAGA
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|S60|U|950
7QCA|1|S60|A|951
7QCA|1|S60|A|952
7QCA|1|S60|C|953
7QCA|1|S60|G|954
7QCA|1|S60|A|955
*
7QCA|1|S60|U|993
7QCA|1|S60|G|994
7QCA|1|S60|A|995
7QCA|1|S60|G|996
7QCA|1|S60|A|997
7QCA|1|S60|U|998
7QCA|1|S60|C|999
*
7QCA|1|S60|G|1049
7QCA|1|S60|G|1050
7QCA|1|S60|C|1051
7QCA|1|S60|A|1052
7QCA|1|S60|A|1053
7QCA|1|S60|G|1054
7QCA|1|S60|A|1055
Current chains
- Chain S60
- RNA SSU
Nearby chains
- Chain SC0
- 40S ribosomal protein S2
- Chain SD0
- 40S ribosomal protein S3
- Chain SDD
- 40S ribosomal protein S29
- Chain SQ0
- 40S ribosomal protein S16
- Chain SR0
- eS17 SR0
- Chain SU0
- 40S ribosomal protein S20
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