J3_7QCA_022

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UG*UUUGG*CGCGAA

Length

13 nucleotides

Bulged bases

7QCA|1|S60|U|972, 7QCA|1|S60|G|973

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|U|960
7QCA|1|S60|G|961
*
7QCA|1|S60|U|970
7QCA|1|S60|U|971
7QCA|1|S60|U|972
7QCA|1|S60|G|973
7QCA|1|S60|G|974
*
7QCA|1|S60|C|983
7QCA|1|S60|G|984
7QCA|1|S60|C|985
7QCA|1|S60|G|986
7QCA|1|S60|A|987
7QCA|1|S60|A|988

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SA0

40S ribosomal protein S0

Chain SAA

40S ribosomal protein S26

Chain SC0

40S ribosomal protein S2

Chain SR0

eS17 SR0

Chain SV0

Ribosomal protein S21E