J3_7QCA_026
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAACAGUGUAA*UCAAAAGGA*UACAUACGGUG
- Length
- 31 nucleotides
- Bulged bases
- 7QCA|1|L50|U|211, 7QCA|1|L50|G|212, 7QCA|1|L50|U|213, 7QCA|1|L50|U|314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|L50|C|205
7QCA|1|L50|A|206
7QCA|1|L50|A|207
7QCA|1|L50|C|208
7QCA|1|L50|A|209
7QCA|1|L50|G|210
7QCA|1|L50|U|211
7QCA|1|L50|G|212
7QCA|1|L50|U|213
7QCA|1|L50|A|214
7QCA|1|L50|A|215
*
7QCA|1|L50|U|234
7QCA|1|L50|C|235
7QCA|1|L50|A|236
7QCA|1|L50|A|237
7QCA|1|L50|A|238
7QCA|1|L50|A|239
7QCA|1|L50|G|240
7QCA|1|L50|G|241
7QCA|1|L50|A|242
*
7QCA|1|L50|U|305
7QCA|1|L50|A|306
7QCA|1|L50|C|307
7QCA|1|L50|A|308
7QCA|1|L50|U|309
7QCA|1|L50|A|310
7QCA|1|L50|C|311
7QCA|1|L50|G|312
7QCA|1|L50|G|313
7QCA|1|L50|U|314
7QCA|1|L50|G|315
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LG0
- 60S ribosomal protein L8
- Chain LHH
- Ribosomal L29 protein
- Chain LII
- 60S ribosomal protein L36
- Chain LL0
- 60S ribosomal protein L13
- Chain LN0
- Ribosomal protein L15
Coloring options: