J3_7QCA_035
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAAG*CAGAGUAAG*CGAUG
- Length
- 19 nucleotides
- Bulged bases
- 7QCA|1|S60|G|562, 7QCA|1|S60|A|566
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|S60|C|500
7QCA|1|S60|G|501
7QCA|1|S60|A|502
7QCA|1|S60|A|503
7QCA|1|S60|G|504
*
7QCA|1|S60|C|560
7QCA|1|S60|A|561
7QCA|1|S60|G|562
7QCA|1|S60|A|563
7QCA|1|S60|G|564
7QCA|1|S60|U|565
7QCA|1|S60|A|566
7QCA|1|S60|A|567
7QCA|1|S60|G|568
*
7QCA|1|S60|C|664
7QCA|1|S60|G|665
7QCA|1|S60|A|666
7QCA|1|S60|U|667
7QCA|1|S60|G|668
Current chains
- Chain S60
- RNA SSU
Nearby chains
- Chain SBB
- eS27 SBB
- Chain SH0
- 40S ribosomal protein S7
- Chain SL0
- 40S ribosomal protein S11
- Chain SN0
- 40S ribosomal protein S13
- Chain SW0
- 40S ribosomal protein S15A
- Chain SX0
- uS12 SX0
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