J3_7QCA_036
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UAG*CGACAGG*CAGGAAGGAA
- Length
- 20 nucleotides
- Bulged bases
- 7QCA|1|S60|A|1045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|S60|U|1002
7QCA|1|S60|A|1003
7QCA|1|S60|G|1004
*
7QCA|1|S60|C|1019
7QCA|1|S60|G|1020
7QCA|1|S60|A|1021
7QCA|1|S60|C|1022
7QCA|1|S60|A|1023
7QCA|1|S60|G|1024
7QCA|1|S60|G|1025
*
7QCA|1|S60|C|1037
7QCA|1|S60|A|1038
7QCA|1|S60|G|1039
7QCA|1|S60|G|1040
7QCA|1|S60|A|1041
7QCA|1|S60|A|1042
7QCA|1|S60|G|1043
7QCA|1|S60|G|1044
7QCA|1|S60|A|1045
7QCA|1|S60|A|1046
Current chains
- Chain S60
- RNA SSU
Nearby chains
- Chain SDD
- 40S ribosomal protein S29
- Chain SF0
- 40S ribosomal protein S5
- Chain SGG
- Guanine nucleotide binding protein beta subunit
- Chain SQ0
- 40S ribosomal protein S16
- Chain SR0
- eS17 SR0
- Chain SU0
- 40S ribosomal protein S20
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