J3_7QG8_034

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7QG8|1|N|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QG8_034 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0489

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7QG8|1|N|G|297
7QG8|1|N|G|298
7QG8|1|N|A|299
7QG8|1|N|A|300
7QG8|1|N|G|301
*
7QG8|1|N|C|316
7QG8|1|N|G|317
7QG8|1|N|C|318
7QG8|1|N|G|319
7QG8|1|N|A|320
7QG8|1|N|U|321
7QG8|1|N|A|322
7QG8|1|N|C|323
7QG8|1|N|A|324
7QG8|1|N|G|325
*
7QG8|1|N|C|337
7QG8|1|N|G|338
7QG8|1|N|U|339
7QG8|1|N|A|340
7QG8|1|N|C|341

Current chains

Chain N

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L4

Chain h

50S ribosomal protein L24