3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UGAUCUA*UGG*CAAA
Length
14 nucleotides
Bulged bases
7QGH|1|N|U|686, 7QGH|1|N|A|792
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7QGH_016 not in the Motif Atlas
Homologous match to J3_5J7L_038
Geometric discrepancy: 0.0668
The information below is about J3_5J7L_038
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64189.2
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

7QGH|1|N|U|683
7QGH|1|N|G|684
7QGH|1|N|A|685
7QGH|1|N|U|686
7QGH|1|N|C|687
7QGH|1|N|U|688
7QGH|1|N|A|689
*
7QGH|1|N|U|773
7QGH|1|N|G|774
7QGH|1|N|G|775
*
7QGH|1|N|C|791
7QGH|1|N|A|792
7QGH|1|N|A|793
7QGH|1|N|A|794

Current chains

Chain N
23S rRNA

Nearby chains

Chain P
50S ribosomal protein L2
Chain p
50S ribosomal protein L34

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1709 s
Application loaded.