J3_7QGH_030

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7QGH|1|0|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGH_030 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.111

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7QGH|1|0|C|990
7QGH|1|0|U|991
7QGH|1|0|U|992
7QGH|1|0|G|993
7QGH|1|0|A|994
7QGH|1|0|C|995
7QGH|1|0|A|996
7QGH|1|0|U|997
*
7QGH|1|0|A|1044
7QGH|1|0|C|1045
7QGH|1|0|A|1046
7QGH|1|0|G|1047
*
7QGH|1|0|C|1210
7QGH|1|0|U|1211
7QGH|1|0|U|1212
7QGH|1|0|A|1213
7QGH|1|0|C|1214
7QGH|1|0|G|1215

Current chains

Chain 0

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S14