J3_7QGN_007
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7QGN|1|0|A|975, 7QGN|1|0|G|976, 7QGN|1|0|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QGN_007 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.064
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7QGN|1|0|U|955
7QGN|1|0|U|956
7QGN|1|0|U|957
7QGN|1|0|A|958
7QGN|1|0|A|959
7QGN|1|0|U|960
7QGN|1|0|U|961
7QGN|1|0|C|962
*
7QGN|1|0|G|973
7QGN|1|0|A|974
7QGN|1|0|A|975
7QGN|1|0|G|976
7QGN|1|0|A|977
7QGN|1|0|A|978
7QGN|1|0|C|979
7QGN|1|0|C|980
7QGN|1|0|U|981
7QGN|1|0|U|982
7QGN|1|0|A|983
7QGN|1|0|C|984
*
7QGN|1|0|G|1221
7QGN|1|0|G|1222
7QGN|1|0|C|1223
7QGN|1|0|U|1224
7QGN|1|0|A|1225
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain 9
- 30S ribosomal protein S10
- Chain A
- Transfer RNA; tRNA
- Chain F
- 30S ribosomal protein S13
- Chain G
- 30S ribosomal protein S14
- Chain t
- 30S ribosomal protein S19
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