J3_7QGU_003

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

7QGU|1|A|U|301

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_003 not in the Motif Atlas

Homologous match to J3_7RQB_003

Geometric discrepancy: 0.2103

The information below is about J3_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97921.1

Basepair signature

cWW-F-F-tSH-tWH-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7QGU|1|A|C|272
7QGU|1|A|A|273
7QGU|1|A|A|274
7QGU|1|A|A|275
7QGU|1|A|C|276
*
7QGU|1|A|G|295
7QGU|1|A|G|296
7QGU|1|A|G|297
7QGU|1|A|U|298
7QGU|1|A|U|299
7QGU|1|A|G|300
7QGU|1|A|U|301
7QGU|1|A|A|302
*
7QGU|1|A|U|416
7QGU|1|A|G|417

Current chains

Chain A

23S rRNA

Nearby chains