J3_7QGU_011

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7QGU|1|A|A|2547, 7QGU|1|A|U|2548

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_011 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.1749

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7QGU|1|A|C|2546
7QGU|1|A|A|2547
7QGU|1|A|U|2548
7QGU|1|A|C|2549
*
7QGU|1|A|G|2574
7QGU|1|A|U|2575
7QGU|1|A|U|2576
*
7QGU|1|A|A|2590
7QGU|1|A|U|2591
7QGU|1|A|U|2592
7QGU|1|A|A|2593
7QGU|1|A|A|2594
7QGU|1|A|A|2595
7QGU|1|A|G|2596

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L14