J3_7QGU_038

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CUUGACAU*ACAG*CUUAUG

Length

18 nucleotides

Bulged bases

7QGU|1|W|U|1221, 7QGU|1|W|U|1223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_038 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1952

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7QGU|1|W|C|1000
7QGU|1|W|U|1001
7QGU|1|W|U|1002
7QGU|1|W|G|1003
7QGU|1|W|A|1004
7QGU|1|W|C|1005
7QGU|1|W|A|1006
7QGU|1|W|U|1007
*
7QGU|1|W|A|1054
7QGU|1|W|C|1055
7QGU|1|W|A|1056
7QGU|1|W|G|1057
*
7QGU|1|W|C|1219
7QGU|1|W|U|1220
7QGU|1|W|U|1221
7QGU|1|W|A|1222
7QGU|1|W|U|1223
7QGU|1|W|G|1224

Current chains

Chain W

16S rRNA

Nearby chains

Chain s

30S ribosomal protein S14 type Z