J3_7QIW_015

3D structure

PDB id

7QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CCU*AAACG*CUCCG

Length

13 nucleotides

Bulged bases

7QIW|1|2|C|3384

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIW|1|2|C|3291
7QIW|1|2|C|3292
7QIW|1|2|U|3293
*
7QIW|1|2|A|3307
7QIW|1|2|A|3308
7QIW|1|2|A|3311
7QIW|1|2|C|3312
7QIW|1|2|G|3313
*
7QIW|1|2|C|3381
7QIW|1|2|U|3382
7QIW|1|2|C|3383
7QIW|1|2|C|3384
7QIW|1|2|G|3385

Current chains

Chain 2

25S rRNA

Nearby chains

Chain E

Ribosomal protein L3

Chain R

50S ribosomal protein L22, chloroplastic

Chain f

60S ribosomal protein eL31