J3_7QIZ_010
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GUC*GAUAG*CGUAC
- Length
- 13 nucleotides
- Bulged bases
- 7QIZ|1|2|A|1568, 7QIZ|1|2|U|1585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|2|G|1549
7QIZ|1|2|U|1550
7QIZ|1|2|C|1551
*
7QIZ|1|2|G|1567
7QIZ|1|2|A|1568
7QIZ|1|2|U|1569
7QIZ|1|2|A|1570
7QIZ|1|2|G|1571
*
7QIZ|1|2|C|1583
7QIZ|1|2|G|1584
7QIZ|1|2|U|1585
7QIZ|1|2|A|1586
7QIZ|1|2|C|1587
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- 60S ribosomal protein L8
- Chain J
- Ribosomal_L7Ae domain-containing protein
- Chain P
- Ribosomal protein L15
- Chain Z
- Ribosomal_L23eN domain-containing protein
- Chain l
- Ribosomal protein L37
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