J3_7QIZ_018
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- UGGA*UUAACA*UA
- Length
- 12 nucleotides
- Bulged bases
- 7QIZ|1|S2|C|867
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|S2|U|636
7QIZ|1|S2|G|637
7QIZ|1|S2|G|638
7QIZ|1|S2|A|639
*
7QIZ|1|S2|U|863
7QIZ|1|S2|U|864
7QIZ|1|S2|A|865
7QIZ|1|S2|A|866
7QIZ|1|S2|C|867
7QIZ|1|S2|A|868
*
7QIZ|1|S2|U|968
7QIZ|1|S2|A|969
Current chains
- Chain S2
- 18S
Nearby chains
- Chain CA
- 40S body ribosomal protein uS12
- Chain HA
- 30S ribosomal protein S15, chloroplastic
- Chain JA
- 40S ribosomal protein S15a-1
- Chain LA
- 40S ribosomal protein S27
- Chain x
- 40S ribosomal protein S7
- Chain z
- Ribosomal_S17_N domain-containing protein
Coloring options: