J3_7QIZ_020
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CAUUC*GAACAACUG*CAU(PSU)(PSU)G
- Length
- 20 nucleotides
- Bulged bases
- 7QIZ|1|S2|C|937
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|S2|C|883
7QIZ|1|S2|A|884
7QIZ|1|S2|U|885
7QIZ|1|S2|U|886
7QIZ|1|S2|C|887
*
7QIZ|1|S2|G|931
7QIZ|1|S2|A|932
7QIZ|1|S2|A|933
7QIZ|1|S2|C|934
7QIZ|1|S2|A|935
7QIZ|1|S2|A|936
7QIZ|1|S2|C|937
7QIZ|1|S2|U|938
7QIZ|1|S2|G|939
*
7QIZ|1|S2|C|946
7QIZ|1|S2|A|947
7QIZ|1|S2|U|948
7QIZ|1|S2|PSU|949
7QIZ|1|S2|PSU|950
7QIZ|1|S2|G|951
Current chains
- Chain S2
- 18S
Nearby chains
- Chain DA
- 40S ribosomal protein S26
- Chain HA
- 30S ribosomal protein S15, chloroplastic
- Chain IA
- Ribosomal protein S14
- Chain q
- 60S ribosomal protein eL43
- Chain v
- 40S ribosomal protein S3a
Coloring options: