J3_7QV1_030

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCAG*CGAAC*GAUGAG

Length

15 nucleotides

Bulged bases

7QV1|1|V|A|811

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV1_030 not in the Motif Atlas

Geometric match to J3_5TBW_005

Geometric discrepancy: 0.328

The information below is about J3_5TBW_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_33851.1

Basepair signature

cWW-tSH-F-F-tHS-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

7QV1|1|V|C|744
7QV1|1|V|C|745
7QV1|1|V|A|746
7QV1|1|V|G|747
*
7QV1|1|V|C|779
7QV1|1|V|G|780
7QV1|1|V|A|781
7QV1|1|V|A|782
7QV1|1|V|C|783
*
7QV1|1|V|G|807
7QV1|1|V|A|808
7QV1|1|V|U|809
7QV1|1|V|G|810
7QV1|1|V|A|811
7QV1|1|V|G|812

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2