J3_7QV3_005

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGAUCUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

7QV3|1|V|U|733, 7QV3|1|V|G|839, 7QV3|1|V|A|840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_005 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.1249

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7QV3|1|V|U|730
7QV3|1|V|G|731
7QV3|1|V|A|732
7QV3|1|V|U|733
7QV3|1|V|C|734
7QV3|1|V|U|735
7QV3|1|V|A|736
*
7QV3|1|V|U|820
7QV3|1|V|A|821
7QV3|1|V|G|822
*
7QV3|1|V|C|838
7QV3|1|V|G|839
7QV3|1|V|A|840
7QV3|1|V|A|841

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2