J3_7QV3_011

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UUG*CUAACC*GAGACAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_011 not in the Motif Atlas

Homologous match to J3_4WF9_007

Geometric discrepancy: 0.1807

The information below is about J3_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_07703.1

Basepair signature

cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F

Number of instances in this motif group

2

Unit IDs

7QV3|1|V|U|2120
7QV3|1|V|U|2121
7QV3|1|V|G|2122
*
7QV3|1|V|C|2225
7QV3|1|V|U|2226
7QV3|1|V|A|2227
7QV3|1|V|A|2228
7QV3|1|V|C|2229
7QV3|1|V|C|2230
*
7QV3|1|V|G|2251
7QV3|1|V|A|2252
7QV3|1|V|G|2253
7QV3|1|V|A|2254
7QV3|1|V|C|2255
7QV3|1|V|A|2256
7QV3|1|V|G|2257

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L9

Chain u

50S ribosomal protein L28