J3_7QV3_035

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CUUGACAU*ACAG*CUUAUG

Length

18 nucleotides

Bulged bases

7QV3|1|a|U|1221, 7QV3|1|a|U|1223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_035 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1496

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7QV3|1|a|C|1000
7QV3|1|a|U|1001
7QV3|1|a|U|1002
7QV3|1|a|G|1003
7QV3|1|a|A|1004
7QV3|1|a|C|1005
7QV3|1|a|A|1006
7QV3|1|a|U|1007
*
7QV3|1|a|A|1054
7QV3|1|a|C|1055
7QV3|1|a|A|1056
7QV3|1|a|G|1057
*
7QV3|1|a|C|1219
7QV3|1|a|U|1220
7QV3|1|a|U|1221
7QV3|1|a|A|1222
7QV3|1|a|U|1223
7QV3|1|a|G|1224

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14