J3_7QVP_056
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAG*CGAGAC*GCA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QVP|1|S3|U|1342
7QVP|1|S3|U|1343
7QVP|1|S3|A|1344
7QVP|1|S3|G|1345
*
7QVP|1|S3|C|1384
7QVP|1|S3|G|1385
7QVP|1|S3|A|1386
7QVP|1|S3|G|1387
7QVP|1|S3|A|1388
7QVP|1|S3|C|1389
*
7QVP|1|S3|G|1481
7QVP|1|S3|C|1482
7QVP|1|S3|A|1483
Current chains
- Chain S3
- 18S ribosomal RNA
Nearby chains
- Chain RC
- 40S ribosomal protein S2
- Chain RD
- 40S ribosomal protein S3
- Chain RQ
- 40S ribosomal protein S16
- Chain RR
- 40S ribosomal protein S17
- Chain RU
- 40S ribosomal protein S20
- Chain Rd
- 40S ribosomal protein S29
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