J3_7QWQ_020

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

7QWQ|1|5|C|216, 7QWQ|1|5|C|217, 7QWQ|1|5|A|218, 7QWQ|1|5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QWQ|1|5|C|196
7QWQ|1|5|A|197
7QWQ|1|5|A|198
7QWQ|1|5|G|199
*
7QWQ|1|5|C|215
7QWQ|1|5|C|216
7QWQ|1|5|C|217
7QWQ|1|5|A|218
7QWQ|1|5|G|219
7QWQ|1|5|C|220
7QWQ|1|5|C|221
7QWQ|1|5|C|222
7QWQ|1|5|G|223
7QWQ|1|5|U|224
7QWQ|1|5|G|225
7QWQ|1|5|G|226
7QWQ|1|5|A|227
7QWQ|1|5|C|228
*
7QWQ|1|5|G|240
7QWQ|1|5|G|241
7QWQ|1|5|U|242
7QWQ|1|5|A|243
7QWQ|1|5|G|244

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain Y

Ribosomal protein L26