3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
Length
33 nucleotides
Bulged bases
7QWR|1|5|C|962, 7QWR|1|5|G|963, 7QWR|1|5|G|965, 7QWR|1|5|G|1281
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWR|1|5|A|711
7QWR|1|5|C|712
7QWR|1|5|C|713
*
7QWR|1|5|G|955
7QWR|1|5|A|956
7QWR|1|5|G|957
7QWR|1|5|G|958
7QWR|1|5|G|959
7QWR|1|5|A|960
7QWR|1|5|G|961
7QWR|1|5|C|962
7QWR|1|5|G|963
7QWR|1|5|A|964
7QWR|1|5|G|965
7QWR|1|5|A|966
7QWR|1|5|C|967
7QWR|1|5|C|968
7QWR|1|5|C|969
7QWR|1|5|G|970
7QWR|1|5|U|971
7QWR|1|5|C|972
7QWR|1|5|G|973
7QWR|1|5|C|974
7QWR|1|5|C|975
7QWR|1|5|G|976
*
7QWR|1|5|C|1278
7QWR|1|5|A|1279
7QWR|1|5|C|1280
7QWR|1|5|G|1281
7QWR|1|5|G|1282
7QWR|1|5|G|1283
7QWR|1|5|G|1284
7QWR|1|5|U|1285

Current chains

Chain 5
28S rRNA

Nearby chains

Chain C
60S ribosomal protein L4
Chain E
60S ribosomal protein L6
Chain F
uL30
Chain e
Ribosomal protein L32
Chain f
60S ribosomal protein L35a
Chain r
60S ribosomal protein L28

Coloring options:

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