J3_7QWR_018
3D structure
- PDB id
- 7QWR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGCAGCUAGCU*AUU*ACACU
- Length
- 20 nucleotides
- Bulged bases
- 7QWR|1|8|U|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QWR_018 not in the Motif Atlas
- Geometric match to J3_4WF9_001
- Geometric discrepancy: 0.2809
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7QWR|1|8|A|44
7QWR|1|8|C|45
7QWR|1|8|G|46
7QWR|1|8|C|47
7QWR|1|8|A|48
7QWR|1|8|G|49
7QWR|1|8|C|50
7QWR|1|8|U|51
7QWR|1|8|A|52
7QWR|1|8|G|53
7QWR|1|8|C|54
7QWR|1|8|U|55
*
7QWR|1|8|A|62
7QWR|1|8|U|63
7QWR|1|8|U|64
*
7QWR|1|8|A|95
7QWR|1|8|C|96
7QWR|1|8|A|97
7QWR|1|8|C|98
7QWR|1|8|U|99
Current chains
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- Ribosomal_L23eN domain-containing protein
- Chain h
- 60S ribosomal protein L35
- Chain j
- Ribosomal protein L37
- Chain l
- Ribosomal protein L39
Coloring options: